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1. SNIPR
​SNIPR is a software to design single nucleotide specific programmable riboregulators that can be applied for precise gene regulation and molecular diagnostics.
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2. CrowderOxDNA  and CrowderDNAViewer
​Crowder-oxDNA is a software package to study DNA interactions under crowded environment with molecular dynamics. ​ ​CrowdeDNA Viewer is a web-based software used to visualize oxDNA simulation with crowding particles.
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University of Florida, Gainesville​
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